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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs7518506 chr1:5358738 C/T 0 509 37.67 31.77 1.7 KM Plot
KIRC rs7521228 chr1:70159135 C/T 8.88E-16 509 1.8 40.1 37.03 KM Plot
KIRC rs75255750 chr2:109466171 G/C 8.46E-12 508 37.73 26.92 2.3 KM Plot
KIRC rs75323258 chr1:6388589 A/C 7.82E-11 504 37.35 39.7 2.3 KM Plot
KIRC rs7539126 chr1:6380203 G/A 7.82E-11 504 37.35 39.7 2.3 KM Plot
KIRC rs75479466 chr11:34961066 G/A 5.16E-13 507 37.73 26.12 3.48 KM Plot
KIRC rs75504740 chr19:46313376 G/A 7.94E-8 496 38.47 28.65 1.77 KM Plot
KIRC rs7550701 chr1:233153392 A/G 2.95E-5 492 37.4 37.42 14.92 KM Plot
KIRC rs75511804 chr17:5138304 C/T 0.000113 497 36.87 46.7 11.18 KM Plot
KIRC rs75548978 chr11:34794998 A/G 9.5E-8 504 37.53 33.35 3.3 KM Plot
KIRC rs7555294 chr1:97799545 C/T 1.55E-6 487 37.5 45.57 25.82 KM Plot
KIRC rs75609495 chr11:34730058 T/G 6.46E-8 505 37.42 37.08 3.3 KM Plot
KIRC rs75623210 chr3:194933097 G/A 7.21E-9 505 37.47 33.7 6.33 KM Plot
KIRC rs75632692 chr11:34773578 T/A 8.98E-8 506 37.67 33.35 3.3 KM Plot
KIRC rs75709269 chr2:67547584 A/G 1.74E-7 507 37.35 37.73 2.03 KM Plot